ykvP [2019-08-26 09:01:57]

unknown

locus: BSU_13780

pI: 9.81

mw: 46.13 kDa

protein length: 399 aa

gene length: 1200 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.1|Spore coat proteins] → [category|SW 4.2.1.1.8|Not yet assigned]

Gene

Coordinates: 1,444,099 → 1,445,298

The protein

[SW|Domains]

• contains a N-acetylglucosamine-polymer-binding [SW|LysM domain] [Pubmed|18430080]

[SW|Localization]

• spore wall (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]-[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]-[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]-[gene|4FDAD5E5660EDB346A37C1F41BD8B7B66561E529|ykzR]
  description: [Pubmed|11011148,22383849]

  sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|11011148,15699190], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

  regulation

  • expressed late during sporulation in the mother cell ([protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]) [Pubmed|11011148,15699190]

Biological materials

Mutant

• MGNA-A792 (ykvP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/792 NBRP B. subtilis, Japan]
• BKE13780 (Δ[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACATTTCCATCCTCTCT, downstream forward: _UP4_TTATTCTAAAGGAGAGTAAT
• BKK13780 (Δ[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACATTTCCATCCTCTCT, downstream forward: _UP4_TTATTCTAAAGGAGAGTAAT

References

Reviews

• 18430080

Original publications

• 11011148,15699190